Protein chemistry and Proteomics:
Adelina Rogowska-Wrzesinska
Blagoy Blagoev
Frank Kjeldsen
Irina Kratchmarova
Jens S. Andersen
Martin R. Larsen
Ole N. Jensen
Cagla Sahin
Structural proteomics: Thomas J.D. Jørgensen
Nucleic acid analysis: Finn Kirpekar
Lipids and lipidomics:
Christer S. Ejsing
Nils J. Færgeman
Metabolites and metabolomics: Nils J. Færgeman
Mass spectrometry imaging: Ole N. Jensen
Proteomics informatics: Veit Schwämmle
| Model | Manufacturer | Geometry | Features |
| Synapt G2 | Waters | TWIMS-Q-TOF | HDX-MS setup |
| Synapt G2 (Native/TWIMS) | Waters | TWIMS-Q-TOF | Native MS, ion mobility (TWIMS), high-mass optimized, nESI probe, MS Vision upgrade |
| Eclipse | Thermo | Tribrid orbitrap | ETD/UVPD/PTCR |
| Apex | Thermo | Tribrid orbitrap |
ETD, IR-MPD, PTCR, FAIMS Pro Duo (Structural Biology setup) |
| Fusion | Thermo | Tribrid orbitrap | Lipidomics setup |
| Exploris480 (x4) | Thermo | Q-Orbitrap | FAIMS Pro |
| Q-Exactive HF | Thermo | Q-Orbitrap | Metabolomics |
| Excedion Pro | Thermo | Orbitrap | ETD (Structural Biology setup) |
| Orbitrap Astral (x2) | Thermo | Asymmetric track lossless analyzer | Quantitative proteomics |
| timsOmni | Bruker | tims-OmniTrap-QTOF | Ion mobility, ExD fragmentation, Multimodal-MS/ |
| timsTOF HT | Bruker | tims-Q-TOF | PASEF, Quantitative proteomics |
| timsTOF fleX | Bruker | tims-Q-TOF | PASEF, Quantitative proteomics / MALDI MSI |
| timsMetabo | Bruker |
tims-Q-TOF |
Metabolomics |
| Model | Manufacturer | Type | Features |
| Ultimate 3000 (x3) | Thermo | UHPLC | RP, HILIC |
| EasyLC (x6) | Thermo | UHPLC | Nanoliter flow, RP |
| Vanquish Neo (x4) | Thermo | UHPLC | Nano/micro-flow |
| Vanquish | Thermo | UHPLC | CapLC |
| NanoElute2 | Bruker | UHPLC | Nanoliter flow |
| Acquity | Waters | UHPLC | Nanoliter flow |
| Agilent 1200 | Agilent | HPLC | Microliter flow |
| Agilent 1290 | Agilent | HPLC | Quarternary gradient |
| Evosep One |
Evosep | SPE-LC robot f. EvoTips. |
30-200 samples per day (proteomics) |
| Evosep Eno |
Evosep |
SPE-LC robot f. EvoTips. |
30-500 samples per day (proteomics) |
| Model | Manufacturer | Geometry | Features |
| NeofleX | Bruker | TOF-TOF | MALDI MS/MS and MS imaging |
| UltrafleXtreme | Bruker | TOF-TOF | MALDI MS imaging |
| timsTOF fleX | Bruker | tims-Q-TOF | MALDI MS imaging |
| Model | Manufacturer | Type | Features |
| M3+ Sprayer | HTX | Matrix sprayer | MS imaging |
| iMatrixSprayer | Tardo | Matrix sprayer | MS imaging |
| BioChrom 31 | BioChrom | Amino Acid Analyzer | Protein quantitation |
| Nanomate Triversa (x2) | Advion | Robotic ESI interface | ESI needle array |
| QFM-4000 | BioLogic | Microvolume quench flow | 10ms-10s stimulation time |