External links to analyze splicing

MaxEntScan

To score 5’splice site 9-mers using different 5'ss models

http://hollywood.mit.edu/burgelab/maxent/Xmaxentscan_scoreseq.html

To score 3’splice site 23-mers using different 3’ss models

http://hollywood.mit.edu/burgelab/maxent/Xmaxentscan_scoreseq_acc.html

ExSkip

EX-SKIP is simple utility that compares the ESE/ESS profile of a wild-type and a mutated allele to quickly determine which exonic variant has the highest chance to skip this exon. 

https://ex-skip.img.cas.cz/

ESE-finder

Prediction of ESE sequences based on SELEX data

http://krainer01.cshl.edu/cgi-bin/tools/ESE3/esefinder.cgi?process=home