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Biomedical mass spectrometry and systems biology

Mass spectrometry equipment and infrastructure for proteomics, lipidomics, metabolomics, etc.

Protein chemistry and Proteomics:

Adelina Rogowska-Wrzesinska
Blagoy Blagoev
Frank Kjeldsen
Irina Kratchmarova
Jens S. Andersen
Martin R. Larsen
Ole N. Jensen
Peter Højrup

Structural proteomics:  Thomas J.D. Jørgensen

Nucleic acid analysis:  Finn Kirpekar

Lipids and lipidomics:  Christer S. Ejsing

Metabolites and metabolomics:  Nils J. Færgeman

Mass spectrometry imaging:  Ole N. Jensen

Proteomics informatics:  Veit Schwämmle

Model   Manufacturer Geometry Features
Synapt G2si Waters TWIMS-Q-TOF HDX-MS setup
Eclipse Thermo Tribrid orbitrap ETD/UVPD/PTCR
Lumos Thermo Tribrid orbitrap ETD, FAIMS Pro
Fusion Thermo Tribrid orbitrap Lipidomics setup
Exploris480 (x4) Thermo Q-Orbitrap FAIMS Pro
Q-Exactive HF (x2) Thermo Q-Orbitrap  
Velos Pro Thermo LTQ-Orbitrap SpectroGlyph ESI/MALDI source
Orbitrap XL/HCD Thermo LTQ-Orbitrap  
timsTOF Pro2 Bruker tims-Q-TOF PASEF
timsTOF fleX Bruker tims-Q-TOF PASEF
Agilent 6530 Agilent Q-TOF Metabolomics setup

 

Model Manufacturer Type Features
Ultimate 3000 (x3) Thermo UHPLC RP, HILIC
EasyLC (x6) Thermo UHPLC Nanoliter flow, RP
Vanquish Neo (x2) Thermo UHPLC Nano/micro-flow
Vanquish Thermo UHPLC CapLC
NanoElute Bruker UHPLC Nanoliter flow
Elute Bruker UHPLC CapLC
Acquity Waters UHPLC Nanoliter flow
Agilent 1200 Agilent HPLC Microliter flow
Agilent 1290 Agilent HPLC Quarternary gradient

 

Model Manufacturer Geometry Features
4800 TOF-TOF ABI/Sciex TOF-TOF CID MS/MS
UltrafleXtreme Bruker TOF-TOF MALDI MS imaging
timsTOF fleX Bruker tims-Q-TOF MALDI MS imaging
Velos Pro Thermo LTQ-Orbitrap SpectroGlyph ESI/MALDI source

 

Model Manufacturer Type Features
M3+ Sprayer HTX Matrix sprayer MS imaging
iMatrixSprayer Tardo Matrix sprayer MS imaging
BioChrom 31 BioChrom Amino Acid Analyzer Protein quantitation
Nanomate Triversa (x2) Advion Robotic ESI interface ESI needle array
Agilent 7200 Q-TOF Agilent GC-MS Metabolomics setup

 

 

Last Updated 10.05.2022